pandora.custom_types module

class pandora.custom_types.AnalysisMode(value, names=None, *, module=None, qualname=None, type=None, start=1, boundary=None)[source]

Bases: Enum

Supported options for analyses to conduct.

BOOTSTRAP = 'BOOTSTRAP'

SLIDING_WINDOW = 'SLIDING_WINDOW'

class pandora.custom_types.EmbeddingAlgorithm(value, names=None, *, module=None, qualname=None, type=None, start=1, boundary=None)[source]

Bases: Enum

Supported options for dimensionality reduction.

MDS = 'MDS'

PCA = 'PCA'

class pandora.custom_types.FileFormat(value, names=None, *, module=None, qualname=None, type=None, start=1, boundary=None)[source]

Bases: Enum

Supported population genetics file formats.

ANCESTRYMAP = 'ANCESTRYMAP'

EIGENSTRAT = 'EIGENSTRAT'

PACKEDANCESTRYMAP = 'PACKEDANCESTRYMAP'

PACKEDPED = 'PACKEDPED'

PED = 'PED'